Pairwise Alignments

Query, 285 a.a., permease from Methanococcus maripaludis S2

Subject, 318 a.a., permease from Methanococcus maripaludis S2

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 64/298 (21%), Positives = 140/298 (46%), Gaps = 31/298 (10%)

Query: 5   DAIFISLEHSLNFFSEAFVYILFGFLMSAYIKVKLKGKLRQKFVHILDNSKKSIIIASLI 64
           D++ I +  S+  FS +++         +Y   +   K+ +++  +  N     I+ASL+
Sbjct: 35  DSLKIVILLSIMIFSISYI--------RSYFPPEKTKKILERYSGVSGN-----IMASLL 81

Query: 65  GAVLPLCSASGIPVANVMNSKGTNLGTTMSFIVSASSITPLGVMLTYSLLGYEIAVMQIL 124
           G V P CS S +P+       G  LG T+SF++++  +      +  +  G++IA++ ++
Sbjct: 82  GTVTPFCSCSSVPIFIGFIEAGVPLGVTLSFLITSPIVNEAAFAVLLASFGWQIAMIYVV 141

Query: 125 ASLVLACSLGIIFYNDKIPFYFEE--YDVKAEETFLKVLFKQ-------------MKNLM 169
           + +++    G+I     +    EE  Y +++    +K L ++             +K + 
Sbjct: 142 SGVIIGVVGGLIIGKLGMENQVEEYVYSIRSRARKIKELTQKERLKFAYDSTRDIVKRVW 201

Query: 170 PAIMIGFLISGFMMYFIPKDIIL-YALSNNIMMYFYASVARIFIFLCPNAMIPLISSVAI 228
             I+IG  I   +  + P++++  YA   N +   +A++  + ++      IP+  ++  
Sbjct: 202 LYILIGIGIGAIIHGYAPEEVLAKYAGPENPLAVIFATIIAVPLYSNALGTIPIAEALIG 261

Query: 229 NGVPKGLILSFLISAPSIGLPMISAMLKVYGKKIALKYVFGVIILGGII-GILVDILL 285
            GV  G  L+F+++  ++  P    + KV   K+ +   FG+  +  +I G L +ILL
Sbjct: 262 KGVGIGTALAFMMATTALSFPEAVLLRKVIKPKL-IAVFFGITSIAIVITGYLFNILL 318