Pairwise Alignments

Query, 285 a.a., permease from Methanococcus maripaludis S2

Subject, 345 a.a., Predicted permeases from Enterobacter asburiae PDN3

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 54/277 (19%), Positives = 123/277 (44%), Gaps = 17/277 (6%)

Query: 12  EHSLNFFSEAFVYILFGFLMSAYIKVKLKGKLRQKFVHILDNSK-KSIIIASLIGAVLPL 70
           ++++ +F   +   + G ++ + I+V +    R   V  L   + +  ++ ++      +
Sbjct: 68  DYAMVYFLAVWKAAVLGVILGSLIQVLIP---RNWLVKTLGQPRFQGTLLGTIFSLPGMM 124

Query: 71  CSASGIPVANVMNSKGTNLGTTMSFIVSASSITPLGVMLTYSLLGYEIAVMQILASL--- 127
           CS    PVA  M  +  ++G  ++F +    + P  ++    +LG+  A ++++A L   
Sbjct: 125 CSCCAAPVAAGMRRQRVSMGGALAFWMGNPLLNPATLVFMGFVLGWHFAFIRLVAGLLTV 184

Query: 128 -VLACSLGIIFYNDKIPFYFEEYDVKAEE-----TFLKVLFKQMKNLMPAIMIGFLISGF 181
            V+A  +  +  +        E DV   +      + + L++   + +P  ++  L  G 
Sbjct: 185 LVVATLVQKLVKDTAAEPAAVELDVSEPQGGFFARWGRALWQLFWSTIPVYILAVLALGA 244

Query: 182 M-MYFIPKDIILYALSNNIMMYFYASVARIFIFLCPNAMIPLISSVAINGVPKGLILSFL 240
             ++  P      A+ N +M     +VA     +   A IP++ ++ + G+     L+ L
Sbjct: 245 ARVWLFPH--ANGAIDNTLMWVIAMAVAGCLFVIPTAAEIPIVQTMMLAGMGTAPALALL 302

Query: 241 ISAPSIGLPMISAMLKVYGKKIALKYVFGVIILGGII 277
           I+ P+I LP +  + K +  K AL    G++ L G++
Sbjct: 303 ITLPAISLPSLIMLRKSFPAK-ALWLTAGLVALSGVM 338