Pairwise Alignments

Query, 285 a.a., permease from Methanococcus maripaludis S2

Subject, 389 a.a., putative permease from Alteromonas macleodii MIT1002

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 53/310 (17%)

Query: 12  EHSLNFFSEAFVYILFGFLMSAYIKVKLKGKLRQKFVHILDNSKKSIIIASLIGAVLPLC 71
           ++ L  F E+  ++L G L++  +   +     +K  H+  +S  SI  A++IGA LPLC
Sbjct: 9   QNFLALFVESAPWLLLGLLVAGIMHELVPVSFLEK--HMGSSSFGSITKAAVIGAPLPLC 66

Query: 72  SASGIPVANVMNSKGTNLGTTMSFIVSASSITPLGVMLTYSLLGYEIAVMQILASLVLAC 131
           S   IP A  +   G +  +T+SF+VS        V ++Y+LLG   A+++ +A++  A 
Sbjct: 67  SCGVIPAALGLRRSGASKSSTISFLVSTPETGVDSVSVSYALLGPLYAIVRPIAAITSAV 126

Query: 132 SLGII--FYNDKIPFYFEEYDV-------------------------KAEET-------- 156
             G++  F+ +       + DV                          +E+T        
Sbjct: 127 YAGLMVRFFAEAEEAQQRQSDVTRSSCCGSKQAPKPEPQIQASTSCCASEKTHAHNHEST 186

Query: 157 -----------FLKVLFKQMKNLMPAIMI----GFLISGFMMYFIPKDIILYALSNNIMM 201
                         VL      L+  I+I    G  ++  +  ++P D  L    + ++ 
Sbjct: 187 DKPKHESSPSKITSVLSYASGKLLEDIVIWLLIGLALAAAIKTWVPTD-FLTQWGDGVVA 245

Query: 202 YFYASVARIFIFLCPNAMIPLISSVAINGVPKGLILSFLISAPSIGLPMISAMLKVYGKK 261
               ++  I +++C  A  PL       G+  G +L FL++ P+  +  +  + +  G +
Sbjct: 246 MLVMALIGIPMYICATASTPLAVGFLAAGLSPGAVLVFLMAGPATNVSTMGMIKQEMGTR 305

Query: 262 IALKYVFGVI 271
             + Y+F VI
Sbjct: 306 TLVLYLFSVI 315



 Score = 40.0 bits (92), Expect = 8e-08
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 170 PAIMIGFLISGFMMYFIPKDIILYAL-SNNIMMYFYASVARIFIFLCPNAMIPLISSVAI 228
           P +++G L++G M   +P   +   + S++      A+V    + LC   +IP    +  
Sbjct: 20  PWLLLGLLVAGIMHELVPVSFLEKHMGSSSFGSITKAAVIGAPLPLCSCGVIPAALGLRR 79

Query: 229 NGVPKGLILSFLISAPSIGLPMISAMLKVYGKKIALKYVFGVIILGGIIGILV 281
           +G  K   +SFL+S P  G+  +S    + G   A+      I      G++V
Sbjct: 80  SGASKSSTISFLVSTPETGVDSVSVSYALLGPLYAIVRPIAAITSAVYAGLMV 132