Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score = 51.2 bits (121), Expect = 2e-10
 Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 42/297 (14%)

Query: 216 PELKLKVFRPIKPMLAQLTPSIEDAMIETKMP----QFETKYDGARVQVHKSNGDVKIYS 271
           P+ + K  +   P   Q TP +  A +  + P    Q+E K+DG R+      G+V++++
Sbjct: 191 PKTRAKARKTALP--EQFTPQL--ATLVDRAPEGDWQYEIKFDGYRMLARIQAGEVRLFT 246

Query: 272 RRLENITNSVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKM 331
           R   + T  +P  V+ ++ L + +  L+GE V+++ D          L  F+   N   +
Sbjct: 247 RNGHDWTECLPRQVKALQALKLKDSWLDGEVVSLNGDG---------LPDFQALQNAFDI 297

Query: 332 AEKIALRIYFFDVLYYN-RGLIDTPLKTRREIL-EKLFGTNNWDSELEKIKKEIFSSKML 389
              + +  Y FD  + N       P++ RR  L E L G+    S L +   E F++   
Sbjct: 298 GRSLDIVYYLFDAPFLNGEDRRQAPVEERRAALKEALAGSR---STLLRY-SEAFTAHH- 352

Query: 390 FSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKVKPTLENLDVV 449
                         ++ F  +  +  EG++ K   +PY    R     K+K  L    V+
Sbjct: 353 --------------RDIFESACDLALEGVIGKRLGSPYV-SRRSADWIKLKCRLSQEFVI 397

Query: 450 VTRAKIGMGKRKDWYGSYELSVKDNDGNLHVIGNVGSGLTEDDLEKLTKIVNEIKIE 506
           V   +   G R   +G+  L+V +ND  L   G VG+G  +  L+ +   +  ++ E
Sbjct: 398 VGYTR-PQGSRSG-FGALLLAV-NNDTGLVYAGRVGTGFDQAALKAIYAQLTPLECE 451