Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 833 a.a., DNA ligase D from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 38/284 (13%)

Query: 228 PMLAQLTPSIEDAMIETKMP----QFETKYDGARVQVHKSNGDVKIYSRRLENITNSVPE 283
           P+ AQL P +  A +    P    ++E K+DG R+       D+++++R   + ++ +P 
Sbjct: 212 PLPAQLQPQL--ATLVDSPPSGDWRYEVKFDGYRILARIEGQDIRLFTRNGHDWSSKMPR 269

Query: 284 LVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFFD 343
            V  ++ L ID+  L+GE V  D ++G    FQ +   F  +++     E+I    Y FD
Sbjct: 270 QVAALRALGIDSAWLDGEMVVAD-ENGM-ADFQALQNAFDTEHD-----ERIT--YYLFD 320

Query: 344 VLYY-NRGLIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSGDPNL 402
           + +   + L   PL+ RR  L +L   N+ D                    K ++     
Sbjct: 321 LPFLGGQDLRQLPLQNRRNTLRQLLEHNHCD------------------VIKYSADFDEP 362

Query: 403 VKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKD 462
           V+   + +  +  EG++ K  D+ Y+ G R     K+K   +  + V+       G R  
Sbjct: 363 VQSLLDSACRLKLEGLIGKRVDSVYS-GRRSPDWIKLK-CKQRQEFVIVGYTDPKGSRSG 420

Query: 463 WYGSYELSVKDND-GNLHVIGNVGSGLTEDDLEKLTKIVNEIKI 505
            +G+  L++ DND G L   G VG+G     L  +   +  ++I
Sbjct: 421 -FGALLLALHDNDSGQLRYAGKVGTGFNATTLASIHARLKPLEI 463