Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 8e-25
 Identities = 89/327 (27%), Positives = 152/327 (46%), Gaps = 33/327 (10%)

Query: 248 QFETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGECVAMDL 307
           Q E K+DG R QV K +G + ++SR  E +T   PEL    + L  D ++L+GE +    
Sbjct: 236 QIEWKWDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTLP-DGVVLDGEILVWKP 294

Query: 308 DSGKP----RPFQDILRRFRRKYNIDKMAEKIALRIYFFDVL-YYNRGLIDTPLKTRREI 362
              +     +PF  + +R  RK    K+     + +  +D+L +        P   RR  
Sbjct: 295 GETETELAVQPFALLQQRIGRKTLGKKLLNDAPVVLQAYDLLEWQGEDWRSRPQHERR-- 352

Query: 363 LEKLFGTNNWDSELEKIKKEIFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKN 422
                      S+LE +  E   + +L S         +L ++    S S+G EG+M+K 
Sbjct: 353 -----------SQLEHLVDEHPLAPVLLSPLLQGPDWADLARQR-EQSRSLGVEGLMLKQ 400

Query: 423 PDAPYTPGSRVKTM-----YKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKDNDGN 477
            +A Y  G R K M     +K+ P   ++D V+  A+ G G+R   Y  Y  +V D    
Sbjct: 401 REALYGVG-RTKDMGIWWKWKIDPF--SVDAVLIYAQRGHGRRASLYSDYTFAVWDAPAG 457

Query: 478 -----LHVIGNVGSGLTEDDLEKLTKIVNEIKIEDLGEEVILEPKIVLEVTYEEIQTSEK 532
                L       SGL+++++ K+  I+ +  +E  G    + P +V E+ +E I  S +
Sbjct: 458 TPGRALVPFAKAYSGLSDEEMRKVDAIIRKTTVETFGPVRSVTPTLVFELGFEGIALSRR 517

Query: 533 YEMGYALRFPRVVQIREDKSINDINTL 559
           ++ G A+RFPR+++ R DK + + + L
Sbjct: 518 HKSGIAVRFPRMLRWRLDKPVEEADDL 544