Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 84/370 (22%), Positives = 153/370 (41%), Gaps = 51/370 (13%)

Query: 213 ENDPELKLKVFRPIKPMLAQLT-PSIED------AMIETKMP-----QFETKYDGARVQV 260
           + +P ++ K  R   P   QL    I D      A+++ K P      +E K+DG R+ V
Sbjct: 13  DTEPPIRSKPRRKRNPAQPQLLFDPIPDRVEPALALLKAKPPTGNEWSWELKWDGYRLAV 72

Query: 261 HKSNGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILR 320
           H     ++I +R   + T+  P + +  + L    +I++GE V +D D G  RP   +L+
Sbjct: 73  HIEPQRIRILTRGGHDWTHRFPAIEQAARALGPATMIIDGEAVVLD-DEG--RPDFGLLQ 129

Query: 321 RFRRKYNIDKMAEKIALRIYFFDVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKI 379
           +                 +Y FD++Y +   L     ++RR +LE        ++   +I
Sbjct: 130 QSLGASGKQAGRRASHAVLYAFDLVYLDGHDLRGVEYRSRRHLLEDTINGPTNEASAIRI 189

Query: 380 KKEIFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKV 439
            + +               +P ++ E       +G EGI+ K  D PY  G R     KV
Sbjct: 190 SETL-------------DAEPAVLLEHV---CRLGLEGIVGKRLDQPYRSG-RTGDWVKV 232

Query: 440 KPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKDNDGNLHVIGNVGSGLTEDDLEKLTKI 499
           K        +V   +         +GS  L+    DG+L  +G+VG+G    ++ +L KI
Sbjct: 233 KCIQSEAFFIVGYER--SASYPAGFGSLALAAY-RDGDLVHVGSVGTGFKGAEIIRLRKI 289

Query: 500 VNEIKIE---------DLGEEVILEPKIVLEVTYEEIQTSEKYEMGYALRFPRVVQIRED 550
           ++ ++ +            + V ++P ++ E+ +    +  K      LR P    +RE 
Sbjct: 290 LDTLRWKRKQPPLPHSGTADIVWVQPTLIAEIEFRAWTSDGK------LRHPSYKGLRER 343

Query: 551 KSINDINTLD 560
           +   D+  LD
Sbjct: 344 QDNADVYQLD 353