Pairwise Alignments

Query, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

Subject, 350 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 84/334 (25%), Positives = 151/334 (45%), Gaps = 52/334 (15%)

Query: 212 IENDPELKLKVFRP---IKPMLAQLTPSIEDAMIETKMPQ-----FETKYDGARVQVHKS 263
           I + P  K    +P     PM  ++ P++E   ++   PQ     +E K+DG R+ VH  
Sbjct: 18  IRSKPRRKRNPAQPQLLFNPMPDRVEPALEQ--LKAHPPQGDQWSWELKWDGYRLAVHIE 75

Query: 264 NGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRR-- 321
              V+I +R   + T+  P + E  + L    +I++GE V +D D G  RP   +L++  
Sbjct: 76  PTGVRILTRGGHDWTHRFPAIAEAARALGPATMIIDGEAVVLD-DEG--RPDFGLLQKSL 132

Query: 322 -FRRKYNIDKMAEKIALRIYFFDVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKI 379
               K   ++ ++ I   +Y FD++Y +   L +   ++RR +LE     N+    L + 
Sbjct: 133 GASGKAAGNRASDAI---LYAFDLMYLDGHDLREMEYRSRRHLLEDTIKANDGAIRLSET 189

Query: 380 KKEIFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKV 439
                              DPN++ E      S+G EGI+ K+ D PY  G R     KV
Sbjct: 190 L----------------DADPNVLLEHIR---SLGLEGIVGKHLDQPYRSG-RAGDWVKV 229

Query: 440 KPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKDNDGNLHVIGNVGSGLTEDDLEKLTKI 499
           K  +E+   +V   +  M      + S  ++    D  +HV GNVG+G  E ++  L K+
Sbjct: 230 K-CIESEAFMVVGYEPSMASPAG-FASLVVAAYRGDELIHV-GNVGTGFKEAEMIGLRKM 286

Query: 500 VNEIK---------IEDLGEEVILEPKIVLEVTY 524
           +++++           +  + V +EP ++ E+ +
Sbjct: 287 LDKLRWKRKPPPVPFTEKTDIVWVEPTLIAEIEF 320