Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 233 a.a., porin from Pseudomonas simiae WCS417

 Score =  128 bits (321), Expect = 1e-34
 Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 25/247 (10%)

Query: 1   MSMIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAI 60
           MS+ K+ I E LGT  LV  G G+A +           GIGLLG       +  +F + +
Sbjct: 1   MSLFKRSITEGLGTFWLVLGGCGSAVLAAAFP----AVGIGLLG-------VSLAFGLTV 49

Query: 61  AAVIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGAAI-GSLLFFACIG-- 117
             + + +G ISG H+NPAV++GL    +FP ++   YI+AQ++G  I  +LL+F   G  
Sbjct: 50  LTMAFAIGHISGCHLNPAVSVGLVVGGRFPARELPAYIVAQVVGGTIAAALLYFIASGKP 109

Query: 118 ----IDSVTIGGLGATAPFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVI 173
                  +   G G  +P  G S     + E + T + + +I+G A D+RAP G A + I
Sbjct: 110 GFELASGLASNGYGEHSP-GGYSMVAGFVCELVMTAMFVVIILG-ATDRRAPPGLAPVAI 167

Query: 174 GLTVGAIITTTGNIAGASLNPARTFGPYLIDSIYGL-NLWYYFPIYIIGPVLGAIVAAFT 232
           GL +  I   +  +   S+NPAR+ GP LI   + +  LW ++    + P+LGA++   T
Sbjct: 168 GLALTLIHLISIPVTNTSVNPARSTGPALIVGGWAIQQLWMFW----LAPILGAVIGGVT 223

Query: 233 YEYLNRE 239
           Y +L +E
Sbjct: 224 YRWLGKE 230