Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 251 a.a., porin from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 3e-30
 Identities = 80/233 (34%), Positives = 114/233 (48%), Gaps = 18/233 (7%)

Query: 3   MIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIAA 62
           M K+L AE +GT  L F G G+A +           GIG +G       +  +F + +  
Sbjct: 1   MQKRLTAEFIGTFWLTFGGCGSAILAAAFPE----LGIGFVG-------VSLAFGLTVLT 49

Query: 63  VIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGA-AIGSLLFFACIGIDSV 121
           + Y +G ISG H NPAVT+GLWA ++    + + YI AQ+ GA    + L+    G    
Sbjct: 50  MAYAVGGISGGHFNPAVTLGLWAGRRVAAGEVLPYIAAQVAGAIGASAALYLIANGQPDF 109

Query: 122 TIGGLGAT--APFAG--ISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVIGLTV 177
            IGG  A    P +        A+LAE I TF  +F+IM V      P GFA + IGL +
Sbjct: 110 AIGGFAANGYGPLSPGLFDMKAALLAECIATFFFLFIIMRVTSSGAVP-GFAPIAIGLAL 168

Query: 178 GAIITTTGNIAGASLNPARTFGPYLI-DSIYGLNLWYYFPIYIIGPVLGAIVA 229
             I      +   S+NPAR+ GP L     Y   LW ++   ++G V+GA+ A
Sbjct: 169 TLIHLVLIPVTNTSVNPARSTGPALFAGGEYLAQLWLFWLAPMVGGVMGALAA 221