Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 196 a.a., aquaporin Z from Escherichia coli ECRC98

 Score =  115 bits (288), Expect = 6e-31
 Identities = 75/203 (36%), Positives = 107/203 (52%), Gaps = 21/203 (10%)

Query: 3   MIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIAA 62
           M +KL AEC GT  LVF G G+A    ++A      GIG  G       +  +F + +  
Sbjct: 1   MFRKLAAECFGTFWLVFGGCGSA----VLAAGFPELGIGFAG-------VALAFGLTVLT 49

Query: 63  VIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGAAIGSLLFFAC----IGI 118
           + + +G ISG H NPAVTIGLWA  +FP K+ V Y+IAQ++G  + + L +       G 
Sbjct: 50  MAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGF 109

Query: 119 DSVTIG----GLGATAPFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVIG 174
           D+   G    G G  +P  G S   A++ E + +   + VI G A DK AP GFA + IG
Sbjct: 110 DAAASGFASNGYGEHSP-GGYSMLSALVVELVLSAGFLLVIHG-ATDKFAPAGFAPIAIG 167

Query: 175 LTVGAIITTTGNIAGASLNPART 197
           L +  I   +  +   S+NPAR+
Sbjct: 168 LALTLIHLISIPVTNTSVNPARS 190



 Score = 43.5 bits (101), Expect = 3e-09
 Identities = 41/106 (38%), Positives = 50/106 (47%), Gaps = 24/106 (22%)

Query: 138 FQAILAEFIGTFLLMFVIMGVAVDKRA-PD---GFAG--LVIGLTVGAIITTTGNIAGAS 191
           F+ + AE  GTF L+F   G AV     P+   GFAG  L  GLTV  +    G+I+G  
Sbjct: 2   FRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGH 61

Query: 192 LNPARTFGPYLIDSIYGLNLWY--YFPI-----YIIGPVLGAIVAA 230
            NPA T G           LW    FP      Y+I  V+G IVAA
Sbjct: 62  FNPAVTIG-----------LWAGGRFPAKEVVGYVIAQVVGGIVAA 96