Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 228 a.a., aquaporin Z from Agrobacterium fabrum C58

 Score =  110 bits (276), Expect = 2e-29
 Identities = 78/233 (33%), Positives = 114/233 (48%), Gaps = 20/233 (8%)

Query: 3   MIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIAA 62
           M +KL+AE  GT  LVF G G+A             GIG  G       +  +F + +  
Sbjct: 1   MGRKLLAEFFGTFWLVFGGCGSAVFAAAFPE----LGIGFTG-------VALAFGLTVLT 49

Query: 63  VIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGAAI-GSLLFFACIGIDSV 121
           + Y +G ISG H NPAV++GL    +FP    V Y+IAQ+ GA +  + L+    G   +
Sbjct: 50  MAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGI 109

Query: 122 TIGGL-----GATAPFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVIGLT 176
            +GG      G  +P  G S   A+L E I T   + VI+G +   R P GFA + IGL 
Sbjct: 110 DLGGFASNGYGEHSP-GGYSLVSALLIEIILTAFFLIVILG-STHGRVPAGFAPIAIGLA 167

Query: 177 VGAIITTTGNIAGASLNPARTFGPYLIDSIYGL-NLWYYFPIYIIGPVLGAIV 228
           +  I   +  +   S+NPAR+ G  L    + L  LW ++   I+G   GA++
Sbjct: 168 LTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVI 220



 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 39/96 (40%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 141 ILAEFIGTFLLMFVIMGVAVDKRA-PD---GFAG--LVIGLTVGAIITTTGNIAGASLNP 194
           +LAEF GTF L+F   G AV   A P+   GF G  L  GLTV  +    G I+G   NP
Sbjct: 5   LLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNP 64

Query: 195 ARTFGPYLIDSIYGLNLWYYFPIYIIGPVLGAIVAA 230
           A + G  +       +L      Y+I  V GAIVAA
Sbjct: 65  AVSVGLTVAGRFPASSL----VPYVIAQVAGAIVAA 96