Pairwise Alignments

Query, 239 a.a., aquaporin family protein from Methanococcus maripaludis S2

Subject, 241 a.a., aquaporin from Agrobacterium fabrum C58

 Score =  118 bits (295), Expect = 1e-31
 Identities = 82/232 (35%), Positives = 116/232 (50%), Gaps = 18/232 (7%)

Query: 3   MIKKLIAECLGTGILVFFGPGAAAMTLMIANNTGTAGIGLLGGLGDWFAIGFSFAIAIAA 62
           M +K I+E LGT  LVF G G+A             GIG LG       + F+F + +  
Sbjct: 1   MSRKFISEFLGTFWLVFGGCGSAVFAAAFPE----LGIGFLG-------VAFAFGLTVLT 49

Query: 63  VIYTMGRISGAHINPAVTIGLWAVKKFPTKDTVLYIIAQLIGAAI-GSLLFFACIGIDSV 121
           + Y +G ISG H NPAV++GL    KFP  + V YI+AQ++GA +  + L+    G    
Sbjct: 50  MAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGA 109

Query: 122 TIGGLGATA----PFAGISYFQAILAEFIGTFLLMFVIMGVAVDKRAPDGFAGLVIGLTV 177
            IGG  A         G S   A+L E I T   + VI+G +   R P GFA + IGL +
Sbjct: 110 EIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILG-STHGRVPVGFAPVAIGLAL 168

Query: 178 GAIITTTGNIAGASLNPARTFGPYLIDSIYGL-NLWYYFPIYIIGPVLGAIV 228
             I   +  +   S+NPAR+ G  L    + L  LW ++   I+G  +GA+V
Sbjct: 169 TLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPILGGAIGAVV 220



 Score = 46.2 bits (108), Expect = 6e-10
 Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 10/95 (10%)

Query: 142 LAEFIGTFLLMFVIMGVAVDKRA-PD---GFAGLVI--GLTVGAIITTTGNIAGASLNPA 195
           ++EF+GTF L+F   G AV   A P+   GF G+    GLTV  +    G I+G   NPA
Sbjct: 6   ISEFLGTFWLVFGGCGSAVFAAAFPELGIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPA 65

Query: 196 RTFGPYLIDSIYGLNLWYYFPIYIIGPVLGAIVAA 230
            + G  +       NL      YI+  VLGA+VAA
Sbjct: 66  VSVGLTVAGKFPAANL----VPYIVAQVLGAVVAA 96