Pairwise Alignments

Query, 823 a.a., DNA topoisomerase I from Methanococcus maripaludis S2

Subject, 180 a.a., Uncharacterized protein YrdD from Escherichia coli ECRC101

 Score = 96.7 bits (239), Expect = 9e-25
 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 4/92 (4%)

Query: 679 KEEKICPKCGNKLLIKKGPYGVFRGCENYPKCKYTEKLNGESNE---KEIVGK-CPKCGS 734
           +  + CPKCG +L+I+ G +G F GC  YP C Y   L   ++    K + G+ CP CG+
Sbjct: 10  RNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPACGA 69

Query: 735 DLYKRKGRFGEFIGCSNYPKCRHTEKIDKKKE 766
           +L  R+GRFG FIGC NYP+C HTE IDK  E
Sbjct: 70  NLVLRQGRFGMFIGCINYPECEHTELIDKPDE 101



 Score = 67.8 bits (164), Expect = 5e-16
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 24/147 (16%)

Query: 597 KCGGDMIIIRTKGKKRFVGCSNYPDCEVTFPLPQKGR---IKVL-NEVCEKC-QNPVIGL 651
           KCG +++I R+     F+GCS YP C+   PL        +KVL  +VC  C  N V+  
Sbjct: 17  KCGAELVI-RSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPACGANLVLRQ 75

Query: 652 DRIKI---CVN-PDCSTRISEEDKKEIEKAEKEEKICPKCGNKLLI-KKGPYG-VFRGCE 705
            R  +   C+N P+C      E  + I+K ++    CP+C    L+ ++  YG  F  C+
Sbjct: 76  GRFGMFIGCINYPEC------EHTELIDKPDETAITCPQCRTGHLVQRRSRYGKTFHSCD 129

Query: 706 NYPKCKYTEKLNGESNEKEIVGKCPKC 732
            YP+C++        N K I G+CP+C
Sbjct: 130 RYPECQFA------INFKPIAGECPEC 150