Pairwise Alignments

Query, 287 a.a., succinate--CoA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 555 a.a., membrane protein FdrA (NCBI) from Escherichia coli BW25113

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 18/181 (9%)

Query: 64  DANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIVAYGKKHGVNIIGPN- 122
           DAN +LI +   +  + A +A+D  +  V + ++++ ++D + +    ++ G+ ++GP+ 
Sbjct: 117 DANLALISVAGEYAAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC 175

Query: 123 -TPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSCVGIGG-- 179
            T  +A   +    ++P     EGNIG++  SGT   E+ SQ+ L+  G +  +G+GG  
Sbjct: 176 GTSMIAGTPLAFANVMP-----EGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRD 230

Query: 180 --DPVTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISKMK---KPVISYIA 234
               V G+  +  LEM   D +++ +  V +      E    K+++ MK   KP ++   
Sbjct: 231 LSREVGGISALTALEMLSADEKSEVLAFVSK---PPAEAVRLKIVNAMKATGKPTVALFL 287

Query: 235 G 235
           G
Sbjct: 288 G 288