Pairwise Alignments

Query, 287 a.a., succinate--CoA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 515 a.a., predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain (NCBI) from Escherichia coli BW25113

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 36/171 (21%), Positives = 85/171 (49%), Gaps = 8/171 (4%)

Query: 64  DANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIVAYGKKHGVNIIGPNT 123
           ++N ++I +   F    A +A+   +  V + ++++ ++D + +     + G+ ++GP+ 
Sbjct: 113 ESNLAVISVNGLFAAREARQALQNDLN-VMLFSDNVSVEDELALKQLAHEKGLLMMGPDC 171

Query: 124 PGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSCVGIGG---- 179
               +  +    +   + ++ GNIG+V  SGT + E++ ++     G S  +G GG    
Sbjct: 172 ---GTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLS 228

Query: 180 DPVTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISKMKKPVI 230
           + + GL  ++ + M ENDP+T+ + ++ +    A      +     +KPV+
Sbjct: 229 EKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVV 279



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 7/93 (7%)

Query: 197 DPETDAVVMVGEIGGNAEEDAAKKMISKMKKPVISYIAGQSAPEGKRMGHAGAIIEKGVG 256
           DPE   +VM   +G  + ED     I  +K+         +A EG+ +     ++   + 
Sbjct: 422 DPEVAVIVMDFVLGFGSHEDPVGSTIETIKE-----AKAIAAAEGRELIILAYVLGTDLD 476

Query: 257 T--AKSKMQALENAGAHVAKRISDIPLLLKEII 287
           T   + + Q L +AG  +A   ++  LL +E I
Sbjct: 477 TPSLEQQSQMLLDAGVILASSSTNTGLLAREFI 509