Pairwise Alignments

Query, 287 a.a., succinate--CoA ligase subunit alpha from Methanococcus maripaludis S2

Subject, 300 a.a., succinyl-CoA synthetase alpha chain from Agrobacterium fabrum C58

 Score =  246 bits (628), Expect = 4e-70
 Identities = 128/296 (43%), Positives = 196/296 (66%), Gaps = 10/296 (3%)

Query: 2   ILLDENTRAIVQGITGNQGRFHTKNMLECK-TNLLAGVTPGKGGQDVYG-----VPVYDT 55
           IL++++T+ +VQG+TG  G FHT+  L    T ++ G+ P KGG+   G     +P++ T
Sbjct: 3   ILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIFAT 62

Query: 56  VLETVEKYDANASLIFIPAPFVKDAAYEAIDAGVELVTIITEHIPIQDSMDIVAYGKKHG 115
           V E  EK  A+AS+I++P     DA  EAI+A +  +T ITE IP+ D + + A   +  
Sbjct: 63  VAEAKEKTGADASVIYVPPAGAADAIIEAIEAEIPFITCITEGIPVMDMVRVKARLDRSK 122

Query: 116 VNIIGPNTPGLASPKVGKLGIIPMSILKEGNIGMVSRSGTLTYEIASQLTLSNYGQSSCV 175
             ++GPN PG+ +P+  K+GI+P SI ++G++G+VSRSGTLTYE   Q +    GQ++ V
Sbjct: 123 SRLLGPNCPGIMTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTTAV 182

Query: 176 GIGGDPVTGLRYIEVLEMFENDPETDAVVMVGEIGGNAEEDAAKKMISK----MKKPVIS 231
           GIGGDPV G  +I++LEMF  D  T +++M+GEIGG+AEEDAA+ +I +     KKP+  
Sbjct: 183 GIGGDPVKGTEFIDILEMFLADDATQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPMAG 242

Query: 232 YIAGQSAPEGKRMGHAGAIIEKGVGTAKSKMQALENAGAHVAKRISDIPLLLKEII 287
           +IAG++AP+G+ MGHAGA++  G G A+SK+ A+E AG  V+   + +   L E++
Sbjct: 243 FIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIKVSPSPARLGKTLVEVL 298