Pairwise Alignments

Query, 306 a.a., adenosylcobinamide-phosphate synthase CbiB from Methanococcus maripaludis S2

Subject, 302 a.a., cobalamin biosynthesis protein CobD from Pseudomonas simiae WCS417

 Score =  119 bits (298), Expect = 9e-32
 Identities = 85/284 (29%), Positives = 138/284 (48%), Gaps = 19/284 (6%)

Query: 8   ILADFFDRYIGEPPEKVHPVVFIGKLISFFENVFKSTNSVNKNRDLLFGFLNVVLVLAIV 67
           + A   D  +GEP  + HP+V  G      E  F +     ++  +    + VV +  + 
Sbjct: 8   VAAVALDALLGEP-RRWHPLVAFGNFAGRIEQRFNTGGRGWRSHGVTAWVIAVVPLTLLA 66

Query: 68  FFMAFEIEQAINSISNSYIRISLYSIILSFSIGHKSLIEFSKSPIKFIVNNDLESAKKSV 127
             +++            YI   L  + L  ++G +SL E      + + ++DL+ A++ V
Sbjct: 67  TALSWA----------PYIGWVLEILALYCALGMRSLGEHVIPVAQALRSDDLDEARRRV 116

Query: 128 QCIVSRNTNELDKKHVLSASIESASENITDSIIAPLIYAAIFGLPGAFLYRAVNTFDAMI 187
             +VSR T+ELD   V  A+ ES  EN +D++ A L +  + G+PG  LYR  NT DAM 
Sbjct: 117 SYLVSRQTSELDSTEVARAATESVLENGSDAVFAALFWFVLAGVPGVVLYRLSNTLDAMW 176

Query: 188 GYKSEKYLYYGKTAAYLDDILNFIPSRIAGMLLIISAPFYGGNVKSALLGYFNEGSKTPS 247
           GY++E++  +G  AA +DD+LN+IP+R+  +   +      G  + AL  +  +G    S
Sbjct: 177 GYRNERFERFGWAAAKIDDVLNYIPARLVALTYAVL-----GKTRLALKCWRTQGPTWDS 231

Query: 248 PNSGYTMATLANSLSMELEKIGYYKLGKGEITVEKALNSLKAVD 291
           PN+G  MA  A +L +EL     Y    GE+     L    A D
Sbjct: 232 PNAGPVMAAGAGALGVELGGAAIY---HGEVHQRPQLGEGPAAD 272