Pairwise Alignments

Query, 469 a.a., Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB from Methanococcus maripaludis S2

Subject, 501 a.a., glutamyl-tRNA amidotransferase subunit B from Agrobacterium fabrum C58

 Score =  278 bits (712), Expect = 2e-79
 Identities = 185/488 (37%), Positives = 265/488 (54%), Gaps = 36/488 (7%)

Query: 4   DLSMKCGLEIHVQVDTNSKLFCQCPTNYKDVEPNTNICPVCIGHPGAKPMPPNKKAIDVA 63
           D  +  GLE+H QV +NSKLF    T + +  PN+N+  V    PG  P+  N++ +  A
Sbjct: 21  DWEIVIGLEVHAQVLSNSKLFSGASTTFGNA-PNSNVSLVDAAMPGMLPVI-NEECVKQA 78

Query: 64  IMVAKMLDCEMVIDKDIYFQRKHYNYPDLPSGYQKTSV--PIGEHGTF------------ 109
           +     L  +  I+    F RK+Y YPDLP GYQ +    PI   GT             
Sbjct: 79  VRTG--LGLKAKINNRSIFDRKNYFYPDLPQGYQISQFKDPIVGEGTITISLGPDRQGNF 136

Query: 110 --LGVGITEVHLEEDPGQ----YKPDLGTVDYNRSGTPLIEIVTDPDMKSPEEAREFLRQ 163
             + +GI  +HLE+D G+      P +  VD NRSG  L+EIV+ PDM+S +EA+ +L +
Sbjct: 137 EDIEIGIERLHLEQDAGKSMHDQHPTMSFVDLNRSGVALMEIVSKPDMRSSDEAKGYLTK 196

Query: 164 LMRLFRYIGHLRG---EGTMRADTNISIKYNGIQ-GNRVEVKNVNSIRGVYKVLKYELIR 219
           L  + RY+G   G   EG+MRAD N+S++  G   G R E+KNVNSIR V + ++YE  R
Sbjct: 197 LRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGEGFGTRCEIKNVNSIRFVGQAIEYEARR 256

Query: 220 QKNVLRRGGEIKMETRAFMESQMITKGMRSKETADDYRYIPDPDLQPIVLNNNWVEKVEA 279
           Q  +L  GG I  ETR F   +  T+ MRSKE A DYRY PDPDL P+  ++ +VE ++ 
Sbjct: 257 QVAILEDGGVIDQETRLFDPGKGETRSMRSKEDAHDYRYFPDPDLLPLEFDDAFVEALKV 316

Query: 280 QMPETPMNKEKRFVEQYGIKEDDAKVLVSDLELADVFEKVVAELGNDKNGISLAVTWIRN 339
            +PE P +K+ RFV   G+   DA +LVS+  +AD +E V A  G D      A  W+ N
Sbjct: 317 DLPELPDDKKARFVADLGLSVYDASILVSEKAIADYYEAVAA--GRD---AKTAANWVIN 371

Query: 340 ELKRVLVYNKIEFFETNLKPEHMVELINSIKDKTISQKIGKTIIEQMVEHKGEKTPKELI 399
           +L   L     +   T + P+ +  +I+ IK +TIS KI K + E +    G   P E++
Sbjct: 372 DLLGALNKFGKDIETTPVSPDQLGGIIDLIKAETISGKIAKDLFEIVWNEGG--NPAEIV 429

Query: 400 TEMGLTVIEDTSELEKACEEAIKNSEKAVEDYKSGNQRALNSVVGQVMKLTRGRAEPGTV 459
              G+  + DT  +EKA ++ I  +   VE  K+    A    VGQVMK T G+A P  V
Sbjct: 430 EARGMKQVTDTGAIEKAVDDIIAANPDQVEKVKAKPTLA-GWFVGQVMKATGGKANPQAV 488

Query: 460 VKILKKKI 467
             ++K K+
Sbjct: 489 QALVKAKL 496