Pairwise Alignments

Query, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 372 a.a., Uncharacterized UPF0118 membrane protein from Variovorax sp. SCN45

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 75/334 (22%), Positives = 139/334 (41%), Gaps = 31/334 (9%)

Query: 14  VLISFLSVMIIAF-----PFLDTIAFACAFAYMTEPFFS-ALKKYTGRTLGAIL-----C 62
           V ++ L+ +  AF     PF   + +  A A +  P F   L+K  G+   A L     C
Sbjct: 10  VFLALLAAVTAAFIWVLLPFFGAVLWGVALAILFTPLFRWLLRKMPGKLNAAALLTLAIC 69

Query: 63  ILMITVPAIILVFLILTDIFEFLNSLDYAGFVDYTVQFINYIG------LQNIAKEDLSS 116
           + ++ +P  ++   ++ ++     ++  +G +++   F   +       L  + + +L  
Sbjct: 70  LFIVILPLAMVGVSLVQEVALVTQNIR-SGQINFAAYFQQILDASPQWLLNLVERFNLGD 128

Query: 117 ILSEIWNFLKPTVNKMAGQIYGLPLLFI---------KGLVTVFLTYYFLKDGYRFKDAV 167
           + +  W          A QI     L I            V ++L Y+ L+DG      +
Sbjct: 129 MAA--WQARISAAAGQASQIIASQALAIGQNTFDFVVSFFVMLYLLYFLLRDGAALSKRM 186

Query: 168 MPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGALS 227
              VP +    T   + K     +     N   A   G +    FW +G+   +    L 
Sbjct: 187 RDAVP-LAKPHTHYLLNKFTTVIRATVKGNVAVAIAQGTLGGLAFWFLGVQGALLWAVLM 245

Query: 228 GILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVNHESS 287
             L+LLP VG   I+ P+++Y++A G + +  +L   GV  + L  D ++RP LV  ++ 
Sbjct: 246 AFLSLLPAVGAALIWGPVAIYFLATGHFWQGGVLIFVGVFVIGLV-DNILRPLLVGKDTQ 304

Query: 288 IHPAFALVAFLMGPLALGITGFALGPLIMGTFDA 321
           +     L++ + G    GI GF +GP+I   F A
Sbjct: 305 MPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMA 338