Pairwise Alignments

Query, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 353 a.a., Permease from Pseudomonas protegens RBAN4

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 76/336 (22%), Positives = 149/336 (44%), Gaps = 25/336 (7%)

Query: 3   ENEYRFLMRIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTG--RTLGAI 60
           +N+   L+   V ++F+ +++   PF   + +A     +  P    L+   G  R L ++
Sbjct: 7   QNKSLLLLLALVTLAFIWILL---PFYGALFWAVILGIVFAPLQRRLQARFGWQRNLTSL 63

Query: 61  ----LCILMITVPAIILVFLILTDIFEFLNSLDYAGFVD---YTVQFINYIG------LQ 107
               +C+++  +P II   L++ +  E    ++ +G +D   Y  QF + +       L 
Sbjct: 64  CTLLICLVIAILPVIITSVLLVQEGAELYKKIE-SGQLDIAAYLAQFKHSLPPYFQHLLD 122

Query: 108 NIAKEDLSSILSEIWNFLKPTVNKMAGQIY----GLPLLFIKGLVTVFLTYYFLKDGYRF 163
                +L  +  ++          +A Q +    G     +   + ++L ++FL+DG   
Sbjct: 123 RFGLGELKGLQEKVVKSAMQGSQYLATQAFSFGQGTFEFVVSFFIMLYLLFFFLRDGPEL 182

Query: 164 KDAVMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTL 223
              +   VP   + +  L + K +   +     N L A T G +    FW + +P+ +  
Sbjct: 183 VRKIRTAVPLAEYQKRRLQL-KFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLW 241

Query: 224 GALSGILTLLPIVGGWTIYMPLSVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVN 283
             L   L+LLP VG   ++ P++ Y++  G   + ++L  FGV  + L  D ++RP LV 
Sbjct: 242 AVLMAFLSLLPAVGAGIVWGPVAAYFLISGAIWQGVVLGLFGVFVIGLV-DNLLRPILVG 300

Query: 284 HESSIHPAFALVAFLMGPLALGITGFALGPLIMGTF 319
            ++ +     L++ L G    G+ GF +GPLI   F
Sbjct: 301 KDTKMPDYLILISTLGGLAIFGLNGFVIGPLIAALF 336