Pairwise Alignments

Query, 336 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 412 a.a., permease from Agrobacterium fabrum C58

 Score = 74.7 bits (182), Expect = 4e-18
 Identities = 83/339 (24%), Positives = 141/339 (41%), Gaps = 33/339 (9%)

Query: 11  RIFVLISFLSVMIIAFPFLDTIAFACAFAYMTEPFFSALKKYTG--RTLGAILCILMI-- 66
           R  +L+  L+ +     FL  +  A    + + P ++ L +  G   TLGA + I++I  
Sbjct: 34  RWLLLLVVLAGIYFFNGFLVPVLAALVIGFASWPVYTRLLRQVGGNTTLGATIAIILIIA 93

Query: 67  --TVPAIILVFLILTDIFEFLNSLDYAGFVDYTV----------------QFINYIGLQN 108
              VP  I      T+I E+     +       V                Q++ YIG   
Sbjct: 94  FLVVPIFIAASYTATEIREWFGWAVHVNKAGAPVPDWIAALPGIGPWLGEQWVKYIGTPG 153

Query: 109 IAKEDLSSIL-SEIWNFLKPTVNKMAGQIY-GLPLLFIKGLVTVFLTYYFLKDGYRFKDA 166
              E +  +  + I N  +  +    G  +  L LLF+  L+ +F  Y   ++G  F   
Sbjct: 154 AIGEVIQLVSGANIGNIYRAILAAGNGAFHLVLTLLFM--LIALFFVY---RNGAGFTRQ 208

Query: 167 VMPHVPEVYHVQTELFIRKLHEAYKNLFVVNALTAFTVGLISIAGFWAIGLPNPVTLGAL 226
           +      +   + E   R +     +      L A   G+I    +W  G+P+PVTLG L
Sbjct: 209 IDLVGERILPTRWERISRVVPATISSTVTGMTLIAIGEGIILGIAYWIAGVPSPVTLGVL 268

Query: 227 SGILTLLPIVGGWTIYMPL-SVYYIAVGMYSKAILLFGFGVLFLSLAPDFVIRPRLVNHE 285
           +G++ L+P  GG  +   L S+Y +A G  +  + LF +G + L +  D  IRP+LV   
Sbjct: 269 TGVMALIP--GGAPLSFTLVSIYLVASGSPAHGLALFVWGSVELFIV-DKTIRPKLVGGP 325

Query: 286 SSIHPAFALVAFLMGPLALGITGFALGPLIMGTFDAIFR 324
             +         + G   +G  G  +GP++M    AI+R
Sbjct: 326 IKLPFLPTFFGLVGGVKTMGFLGLFIGPVLMALLVAIWR 364