Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 307 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 61.2 bits (147), Expect = 3e-14
 Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 13/259 (5%)

Query: 2   INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGA-KAFNF 60
           I+  T+   + G PV +   P M NA  +   I+       V   +       A  A N 
Sbjct: 5   ISGSTQAYLIPGDPVRNVRLPRMFNAVFERFGIDAVLLPMQVPVRDFAVFFKSAFLARNV 64

Query: 61  RGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAI-GYNTDGIGVKKALEEKTG 119
           RG  I  PHK  ++  LD         G+VN V+   G  + G   DG G+  AL+    
Sbjct: 65  RGMVIAPPHKPLVVDLLDGCGLFGRVAGSVNVVRRTEGDQLEGDLFDGEGLIGALDHCNI 124

Query: 120 ILINKNILIIGSGGASRAVSFELAKD---NNLTIVNRNIEKAENLSKEISRKLKKENPLN 176
               K +LI+G+G ++ A+   LA+    N  T +    +KA   +  ++ KL       
Sbjct: 125 PFRGKRVLIVGAGVSAAAIGVALAEGGVVNGATHI-AFYDKAAGKAAGVAAKLDAFFDAT 183

Query: 177 YGGLDINI-ENFDIIINTTPVGMYPHTEVEPVIPLNNIKKD--AVVMDLIYNPLEPVFLK 233
              +D N  E +D+++N TP+G+         +P++  + D  A + D++        ++
Sbjct: 184 VVAVDSNAPEGYDLVVNATPLGLVE----GDALPVDVARMDDHAALFDILLRNQPTPLVR 239

Query: 234 EAKKYGAKTINGIGMLVYQ 252
            A+  G     G  ML+ Q
Sbjct: 240 AARARGLNAQAGFEMLIQQ 258