Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 19/258 (7%)

Query: 1   LINSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAF-N 59
           +I+ KT L+  +G P +   +P+++N       I+       V  E+    +     F N
Sbjct: 1   MISGKTTLIAHLGFPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAASLPQIFKFSN 60

Query: 60  FRGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKT 118
            RG  +T+PHK+  M  +DE+   A   GA N + K  +G  +G   DG G  + +E K 
Sbjct: 61  LRGALVTMPHKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGVERKG 120

Query: 119 GILINKNILIIGSGGASRAVSFELAKDNNLTIVNRNIEKAENLSKEISRKLKKENP-LNY 177
            +     +L+ G+GG   A++  +A      ++  ++ +A   +  ++ +L++  P +  
Sbjct: 121 RLFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSEAS--AGALAARLREHYPQMKV 178

Query: 178 GGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKD------AVVMDLIYNPLEPVF 231
                +   +D+++N TP+GM    E +P +P +  + D       VVM   Y PL    
Sbjct: 179 ATGSKDPAGYDVVVNATPLGM---KEGDP-LPFDVDRIDPGTFVGEVVMKTEYTPL---- 230

Query: 232 LKEAKKYGAKTINGIGML 249
           L+ AK  G +   G  ML
Sbjct: 231 LEAAKAKGCQVQVGTDML 248