Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 301 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 8/255 (3%)

Query: 2   INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGA-KAFNF 60
           ++ +T L  ++G+PV    +P+  NA  +   I+      ++   ++ D   G   + + 
Sbjct: 17  VSGRTLLFPVVGNPVAQVKAPLAFNALFRRAGIDALVVPLELQPASVLDTCRGLLDSGSI 76

Query: 61  RGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTG 119
            G  +T+P+K  + + + +    A  +GAVN + +   G   G   DGIG    L     
Sbjct: 77  GGLLVTVPYKKTLFELVAQPGEPARLVGAVNAIRRSAEGAIAGDLFDGIGFVAGLRAAGH 136

Query: 120 ILINKNILIIGSGGASRAVSFELAKDNN--LTIVNRNIEKAENLSKEISRKLKKENPLNY 177
               + +L++G+GGA  AV+  L       L + + +  +AE L+  +  +      ++ 
Sbjct: 137 EPAGRKVLLVGAGGAGSAVAAALLSAGVAWLGLFDVHTAQAEALAAHLQSRFSGSTVVSL 196

Query: 178 GGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKK 237
             L  +  + DI +N TP+GM P   + P+ P   +    +V+D+I  P E   L+ A +
Sbjct: 197 RTL--SEVDCDIAVNATPLGMKPGDPL-PLDPA-ALPAGTLVVDVIMQPAETPLLRHAAQ 252

Query: 238 YGAKTINGIGMLVYQ 252
            G     G  ML +Q
Sbjct: 253 RGLPVHPGRPMLDHQ 267