Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 298 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  106 bits (265), Expect = 5e-28
 Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 13/268 (4%)

Query: 8   LVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSE-----ENLKDVVAGAKAFNFRG 62
           L GLIG  +  S SP MH    K L +   Y   D        ++L  ++    A  F G
Sbjct: 17  LCGLIGQGIAGSRSPHMHETEAKALGLTLVYRILDADRMGYRADDLPRLLPMLGAMGFDG 76

Query: 63  FNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILI 122
            N+T P K  ++  LD +   A A+GAVNT+   NG+A G NTD  G +           
Sbjct: 77  INVTHPFKQAVIPLLDSLSDAARALGAVNTILFRNGQAHGDNTDWSGYRAHFLAGLADRP 136

Query: 123 NKNILIIGSGGASRAVSFELAK--DNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGL 180
              I +IG+GGA+ AV +        +L IV+   E+A  L+  +               
Sbjct: 137 RGRIAMIGAGGAAAAVGYAHLDLGATHLAIVDPAQERAAALADRLGALFPAARVQAMAHA 196

Query: 181 DINIENFDIIINTTPVGMYPHTEVEPVIPLNN--IKKDAVVMDLIYNPLEPVFLKEAKKY 238
              I + D ++ T+P+GM  H    P +P +   +  D  V D+IY PL    L  A+  
Sbjct: 197 ADAIADADGVVQTSPIGMLSH----PGLPFDPDLLTPDQWVSDIIYFPLHTPLLVAAQAK 252

Query: 239 GAKTINGIGMLVYQGAVSFEIWTGIKPD 266
           G   + G GM V Q A +F ++T + PD
Sbjct: 253 GCAILTGGGMAVMQAAHAFALFTSVAPD 280