Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 273 a.a., putative shikimate 5-dehydrogenase from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 9   VGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIP 68
           + L G P   +F    HN   + L +++ Y A  +  ++L   VAG +A   RG  +++P
Sbjct: 13  ISLAGRP--GTFGVRFHNHLYQQLGLDFYYKA--MRTDDLPAAVAGIRALGIRGCGVSMP 68

Query: 69  HKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILINKNILI 128
           +K   M  +DEID  A AI +VNT+   NG    YNTD + V++ L +   +       +
Sbjct: 69  YKEACMALVDEIDPSAAAIESVNTLVNCNGHLKAYNTDYLAVRQLLAQHQ-VDPGTAFAL 127

Query: 129 IGSGGASRAVSFELAKDNNLT---IVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIE 185
            GSGG ++AV+  L +D       IV RN +    L+     +   E        DI   
Sbjct: 128 RGSGGMAKAVASAL-RDAGFAEGIIVARNEQAGRQLADVCGYRWVPEPG------DICP- 179

Query: 186 NFDIIINTTPVGMYPHTEVEPV-IPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTIN 244
              +++N TP+GM    E E +  P + I     V D++  P +   ++ A+  G   I 
Sbjct: 180 --PMLVNVTPIGMAGGLEAEELAFPEHAIAAAERVFDVVAMPAQTPLIRRAQALGKPVIT 237

Query: 245 GIGMLVYQGAVSFEIWTGIKP 265
           G+ ++  Q    F ++TG++P
Sbjct: 238 GLEVIALQALEQFVLYTGVRP 258