Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

 Score =  115 bits (288), Expect = 1e-30
 Identities = 85/261 (32%), Positives = 124/261 (47%), Gaps = 12/261 (4%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHK 70
           + G+P+ HS SP++H    +    +  Y       +   D   G       G N+T+P K
Sbjct: 6   VFGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFKQGSGG-NVTVPFK 64

Query: 71  MNIMKYLDEIDCDAEAIGAVNTV-KIENGKAIGYNTDGIGVKKALEEKTGI-LINKNILI 128
               +  D +   A   GAVNT+ K+ +G   G NTDG G+ + L    G+ L  K ILI
Sbjct: 65  EEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNAGVELAGKRILI 124

Query: 129 IGSGGASRAVSFELA--KDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINIEN 186
           +G+GGA R V   +   K  +L I NR +EKAE L++E         P+   G     E 
Sbjct: 125 LGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDEL----GPVVASGFAWLQEP 180

Query: 187 FDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGA-KTING 245
            D+IIN T   +    E+ P+          V  D++Y      F + A K GA K ++G
Sbjct: 181 VDVIINATSASLAG--ELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWATKLGAAKVLDG 238

Query: 246 IGMLVYQGAVSFEIWTGIKPD 266
           +GML  Q A +F IW G++PD
Sbjct: 239 LGMLAEQAAEAFFIWRGVRPD 259