Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 272 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (287), Expect = 1e-30
 Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 11/261 (4%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHK 70
           + G+P+ HS SP +H    + L I + Y        N  + +    A   +G NIT+P K
Sbjct: 6   VFGNPIAHSKSPFIHQQFAQQLDIVHPYGRVLAPINNFINTLDAFFAAGGKGANITVPFK 65

Query: 71  MNIMKYLDEIDCDAEAIGAVNTVK-IENGKAIGYNTDGIGVKKALEEKTGILINKNILII 129
                  DE+   A   GAVNT+K +E+G+ +G NTDGIG+   LE    I     IL+I
Sbjct: 66  EEAFARSDELTERASLAGAVNTLKRLEDGRLLGDNTDGIGLLGDLERLNFIRPGLRILLI 125

Query: 130 GSGGASRAVSFE-LAKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLD-INIENF 187
           G+GGASR V    L+ D  +TI NR   +AE L+K  +        ++   +D ++   F
Sbjct: 126 GAGGASRGVLLPLLSLDCAVTITNRTASRAEALAKIFAH----TGSVHATDMDKLDGCEF 181

Query: 188 DIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKT-INGI 246
           D+IIN T  G+       P IP + I       D+ Y      FL    + GAK   +G+
Sbjct: 182 DLIINATSSGIRGEI---PAIPASLIHPSLCCYDMFYQKGNTPFLSWCVQQGAKRYADGL 238

Query: 247 GMLVYQGAVSFEIWTGIKPDI 267
           GMLV Q A +  +W G+ P +
Sbjct: 239 GMLVGQAAHAVLLWHGVLPQV 259