Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 288 a.a., quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) from Escherichia coli BW25113

 Score =  150 bits (378), Expect = 4e-41
 Identities = 83/270 (30%), Positives = 149/270 (55%), Gaps = 9/270 (3%)

Query: 2   INSKTKLVGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFR 61
           + +K +L+GL+ +P+ HS SP M N A++   + + Y AF+V  ++    + G KA   R
Sbjct: 3   VTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMR 62

Query: 62  GFNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGIL 121
           G  +++P+K    +Y+DE+   A+ +GA+NT+  ++G   GYNTDG G  +A++E    +
Sbjct: 63  GTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDI 122

Query: 122 INKNILIIGSGGASRAVSFELAKD--NNLTIVNRNIE-------KAENLSKEISRKLKKE 172
             K ++++G+GGAS A+  + A +    + + NR  E        A+ +++     +   
Sbjct: 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT 182

Query: 173 NPLNYGGLDINIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFL 232
           +  +       + + DI+ N T VGM P      V  ++ +    +V + +YNP     L
Sbjct: 183 DLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLL 242

Query: 233 KEAKKYGAKTINGIGMLVYQGAVSFEIWTG 262
           ++A++ G KTI+G GML++QGA  F +WTG
Sbjct: 243 QQAQQAGCKTIDGYGMLLWQGAEQFTLWTG 272