Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 272 a.a., shikimate dehydrogenase from Escherichia coli ECRC62

 Score =  123 bits (308), Expect = 5e-33
 Identities = 87/261 (33%), Positives = 132/261 (50%), Gaps = 11/261 (4%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFNFRGFNITIPHK 70
           + G+P+ HS SP +H    + L I + Y        +  + +        +G N+T+P K
Sbjct: 6   VFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFRAGGKGANVTVPFK 65

Query: 71  MNIMKYLDEIDCDAEAIGAVNTVK-IENGKAIGYNTDGIGVKKALEEKTGILINKNILII 129
                  DE+   A   GAVNT+K +E+G+ +G NTDGIG+   LE  + I     IL+I
Sbjct: 66  EEAFARADELTERAALAGAVNTLKRLEDGRLLGDNTDGIGLLSDLERLSFIRPGLRILLI 125

Query: 130 GSGGASRAVSFE-LAKDNNLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLD-INIENF 187
           G+GGASR V    L+ D  +TI NR + +AE L+K  +        +   G+D +    F
Sbjct: 126 GAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH----TGSIQALGMDELEGHEF 181

Query: 188 DIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAK-TINGI 246
           D+IIN T  G+       P IP + I       D+ Y   +  FL   ++ G+K   +G+
Sbjct: 182 DLIINATSSGISGDI---PAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGL 238

Query: 247 GMLVYQGAVSFEIWTGIKPDI 267
           GMLV Q A +F +W G+ PD+
Sbjct: 239 GMLVAQAAHAFLLWHGVLPDV 259