Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 269 a.a., shikimate 5-dehydrogenase from Dickeya dadantii 3937

 Score =  106 bits (265), Expect = 5e-28
 Identities = 81/283 (28%), Positives = 146/283 (51%), Gaps = 26/283 (9%)

Query: 1   LINSKTKL-VGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFN 59
           ++N  TKL + L G P   +     HN   + L +++ Y AF  S+  ++  V G +A  
Sbjct: 1   MLNKDTKLCISLSGRP--SNIGTRFHNYLYQKLDLDFIYKAFTTSD--IEHAVKGVRALG 56

Query: 60  FRGFNITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVK----KALE 115
            RG ++++P K + + ++D +   A+AI +VNT+  ENG    YNTD I VK    + L+
Sbjct: 57  IRGCSVSMPFKESCIPFIDTLSDSAKAIDSVNTIVNENGHLTAYNTDYIAVKYLINQNLK 116

Query: 116 EKTGILINKNILIIGSGGASRAV--SFELAKDNNLTIVNRNIEKAENLSKEISRKLKKEN 173
           +KT      ++LI GSGG ++AV  +F  +    +TI+ RN E+  +L+ +   +  ++ 
Sbjct: 117 DKT-----MHVLIKGSGGMAKAVIAAFRDSDFRQVTILARNEERGLSLANKYGFQWCRD- 170

Query: 174 PLNYGGLDINIENFDIIINTTPVGMYPHTEVEPV-IPLNNIKKDAVVMDLIYNPLEPVFL 232
                G+       DI++N TPVGM    E   +    + I+  + + D++  P E   +
Sbjct: 171 ---AAGI-----KADILVNVTPVGMAGGEEQNQLAFTEDQIRIASHIFDVVAFPAETPLI 222

Query: 233 KEAKKYGAKTINGIGMLVYQGAVSFEIWTGIKPDIFVMKKSII 275
           + A+K     I G  ++  Q    F ++TGI+P   +M+++ +
Sbjct: 223 QLARKGDKPVITGAQVIALQALEQFALYTGIRPSEALMQEASV 265