Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 289 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score =  114 bits (285), Expect = 2e-30
 Identities = 81/265 (30%), Positives = 131/265 (49%), Gaps = 9/265 (3%)

Query: 9   VGLIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVS-----EENLKDVVAGAKAFNFRGF 63
           VGLIG  +  S SP +H        ++Y Y   DV+     + +L  ++   +A  F G 
Sbjct: 9   VGLIGADIQLSKSPALHMREGAAHGLDYSYELVDVTARKLPQSSLPALLDELEARGFAGT 68

Query: 64  NITIPHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEKTGILIN 123
           NIT P K  ++ +L E+  DA  +GAVNTV   +G+ IG+NTD  G  ++          
Sbjct: 69  NITHPFKQAVIPHLHELSDDARMLGAVNTVVFRDGRRIGHNTDWYGFYESFVRGLPDAKR 128

Query: 124 KNILIIGSGGASRAVSFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLD 181
              L++G+GGA  AV+    K +   L I +R+  +AE L+ E++ +  +          
Sbjct: 129 DRALLVGAGGAGVAVAHAALKLDIIRLDIFDRDFPRAERLADELNARFGEGRAFAVKDPA 188

Query: 182 INIENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAK 241
            ++   D +I+ TP+GM  H  +     L  I++   V D++Y PL    L  A   G +
Sbjct: 189 DSLPFADGLIHATPMGMPAHPGMPVAAEL--IEQKHWVADIVYMPLVTELLATAASKGCR 246

Query: 242 TINGIGMLVYQGAVSFEIWTGIKPD 266
           T+ G GM V+Q   +F ++ G +PD
Sbjct: 247 TLPGGGMTVFQAVGAFRLFCGREPD 271