Pairwise Alignments

Query, 278 a.a., shikimate dehydrogenase from Methanococcus maripaludis S2

Subject, 286 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score =  129 bits (325), Expect = 6e-35
 Identities = 88/271 (32%), Positives = 140/271 (51%), Gaps = 11/271 (4%)

Query: 11  LIGHPVDHSFSPIMHNAAIKDLKINYRYFAFDVSEENLKDVVAGAKAFN---FRGFNITI 67
           ++G+P+ HS SPI+H+  +K   I   Y A +VS ++    +A  K        G N TI
Sbjct: 14  VVGYPIKHSRSPIIHSYWLKKFGIAGSYTAVEVSPDDFPKFIATLKEGKPGAAVGGNATI 73

Query: 68  PHKMNIMKYLDEIDCDAEAIGAVNTVKIENGKAIGYNTDGIGVKKALEEK-TGILINKNI 126
           PHK    +  D  D  AE +GA NT+ +E GK    NTDG G    L+E+  G    +  
Sbjct: 74  PHKEAAYRLADHPDALAEELGAANTIWMEEGKLHATNTDGYGFVSNLDERHPGWDKTQRA 133

Query: 127 LIIGSGGASRAVSFELAKDN--NLTIVNRNIEKAENLSKEISRKLKKENPLNYGGLDINI 184
           ++ G+GGASRAV   L   +   + +VNR +E+A  L+     ++          L   +
Sbjct: 134 VVFGAGGASRAVIQSLRDRDVAEIHVVNRTVERARELADRFGPRVFSHPQ---AALQEVM 190

Query: 185 ENFDIIINTTPVGMYPHTEVEPVIPLNNIKKDAVVMDLIYNPLEPVFLKEAKKYGAKTIN 244
               + +NTT +GM   TE  P +  +++  +AVV D++Y PL+   L  A++ G  T++
Sbjct: 191 HGAGLFVNTTSLGMNG-TEA-PHLDFSHLAANAVVTDIVYVPLKTPILNMAQEQGIATVD 248

Query: 245 GIGMLVYQGAVSFEIWTGIKPDIFVMKKSII 275
           G+GML++Q    F  W G  P++    +S+I
Sbjct: 249 GLGMLLHQAKPGFRRWFGRIPEVDETLRSLI 279