Pairwise Alignments

Query, 123 a.a., response regulator from Methanococcus maripaludis S2

Subject, 375 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 3/108 (2%)

Query: 5   VKTMIVDDSAFMRNILKRILSTTNKYVVIGEAANGADAIKMAEELQPDLISMDIVMPETD 64
           VK ++VDDS F R  +  ILS      V+G A NG +AI  A  L+PD+I+MD  MP  D
Sbjct: 3   VKVLVVDDSGFFRRRVSEILSADPSIQVVGTATNGKEAIDQAIALKPDVITMDYEMPMMD 62

Query: 65  GITATKAIKEKTPEIKIVMCTSVDQE--QKMIDAVNAGADGYIVKPFQ 110
           GITA + I ++ P   ++M +S+  E  +  +DA++AGA  ++ K F+
Sbjct: 63  GITAVRHIMQRCP-TPVLMFSSLTHEGARVTLDALDAGAVDFLPKNFE 109