Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  120 bits (302), Expect = 1e-31
 Identities = 93/349 (26%), Positives = 168/349 (48%), Gaps = 50/349 (14%)

Query: 129 QGDFTIRANTDR--KYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEE 186
           +GD T R  +DR  +  A+    N  ++ +  M+  +   ++ ++       +  +R  +
Sbjct: 401 EGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQ 460

Query: 187 TSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEM 246
              +      QVATA  + +A  QDV+                A     AA   ++ +  
Sbjct: 461 GVHKQMVEIDQVATAVHEMTATAQDVARN--------------ATQAAQAASHADQAASQ 506

Query: 247 GVKKVENAIETMQSITNVIENLGKAI---QELGNESKKINEVTVLIKDVAEQTGLLALNA 303
           G++ V    +T  SI  + E +GKA+   Q L  +S+ IN +   I+ +AEQT LLALNA
Sbjct: 507 GMRIVR---DTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNA 563

Query: 304 SIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEV 363
           +IEAARAG+ G+GFAVVA E+++LA++ +K+ E+I   I  + +     + +    +   
Sbjct: 564 AIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRT 623

Query: 364 DKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFA 423
           D+ V           K  E++ET ++ ++         +N++ T       IAS +EE +
Sbjct: 624 DESV-------QHAAKAAEALETITQAVS--------VINDMNT------QIASAAEEQS 662

Query: 424 ATAEELTASAEEQSRIMNEIDDAIEE-------ITKSSEQISKDVSKFK 465
           A AE++  +     ++ NE+    +E       +TK +EQ  + +++FK
Sbjct: 663 AVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFK 711