Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 2e-32
 Identities = 75/269 (27%), Positives = 152/269 (56%), Gaps = 7/269 (2%)

Query: 186 ETSEQVADAASQVATAAADQSAKLQDVSDQLE----ATSEITSAVTDAADDTVTAAIEIE 241
           E+++Q+  AA ++++     +  LQ  +D++E    A +E+++AV + A + V++A   +
Sbjct: 268 ESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQAATAVTEMSAAVDEVAGNAVSSAEASQ 327

Query: 242 ---ENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGL 298
              E+S+ G  ++   I ++Q++ + +       + L  +++ I++V  +I+ +A QT L
Sbjct: 328 ASDEDSKHGHYQISETISSIQNLVDEVLGASNKAEGLAVQAQDISKVLEVIRGIAAQTNL 387

Query: 299 LALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGIS 358
           LALNA+IEAARAG+AG+GFAVVA E++SLA+  + S E+I + I G+ +  + T++   S
Sbjct: 388 LALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQDSTEEIEQMITGIQQGTQGTVEALNS 447

Query: 359 GKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASI 418
             ++    +   +    A  KI  ++   S++   I   AE+         +   +I  +
Sbjct: 448 SAEQAGHTLQRANSAGSALEKITAAISQISQRNLVIASAAEQQALVARDVDRSLVNIRDL 507

Query: 419 SEEFAATAEELTASAEEQSRIMNEIDDAI 447
           S + AA A + +A+++E SR+  +++  +
Sbjct: 508 STQTAAGATQTSAASQELSRLAVDLNGLV 536