Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  110 bits (274), Expect = 1e-28
 Identities = 80/315 (25%), Positives = 154/315 (48%), Gaps = 19/315 (6%)

Query: 135 RANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELL----KAKEDLVRAEETSEQ 190
           + +T R  + ++ +T++A++  + M +D +     L    L    + K  L R ++++EQ
Sbjct: 195 QGSTLRLLHGVEPSTSDALI--AQMYSDARGPQARLETAFLSQNARLKTCLTRLQDSAEQ 252

Query: 191 VADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEM---- 246
           ++  A Q    A   SA  + +  Q   T ++++AV   A  T   A  ++  ++     
Sbjct: 253 LSALAGQSDQLA---SASSKGLDRQRVETEQVSAAVNQMAATTQEVASHVQRTADATQQA 309

Query: 247 ------GVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLA 300
                 G +   +  E ++ ++ V+   G  + +L  +S +I  V  +IK +A+QT LLA
Sbjct: 310 NVLTGRGREVARDTREAIERLSAVVSETGVTVAQLAKDSNEIGSVVDVIKGIADQTNLLA 369

Query: 301 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGK 360
           LNA+IEAARAG+ G+GFAVVA E++ LA+   +S   I+  I  +       +    +G+
Sbjct: 370 LNAAIEAARAGEQGRGFAVVADEVRQLAQRTSQSTTQIHGLITQLQASSNNAVQSMENGQ 429

Query: 361 DEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISE 420
            +  +GV  + E + A + I E+V   ++    I    E      E   ++   IA +++
Sbjct: 430 RQAQEGVAWVLEADQALVGISEAVSHITDMTTQIAAATEEQSAVAEEISRNITTIAELAD 489

Query: 421 EFAATAEELTASAEE 435
           + +  A + T  ++E
Sbjct: 490 QTSLQAHQSTDLSKE 504