Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 493 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 2e-27
 Identities = 77/303 (25%), Positives = 146/303 (48%), Gaps = 35/303 (11%)

Query: 142 YNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATA 201
           +NA+Q      +  V+     L      L + + + +  ++  +  ++Q A       TA
Sbjct: 204 FNAMQAGYQRVVNTVAHTARQLDDGAARLASSMNEVQHGMLGQQSETDQAA-------TA 256

Query: 202 AADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSI 261
             + +A +  ++    AT +++        DT+  +         G + V     ++  +
Sbjct: 257 INEMTATVHHIAQHAGATRDLSQTA-----DTLAGS---------GQEVVTRVQRSIAGL 302

Query: 262 TNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVA 321
           +  ++     IQ+L  +S+KIN V  +I  +AEQT LLALNA+IEAARAG+ G+GFAVVA
Sbjct: 303 STGVQQTAVMIQKLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVA 362

Query: 322 SEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGV-------IAIDEVN 374
            E+++LA+ ++ S ++I R ++ +       +D       + D  V        A+ E+ 
Sbjct: 363 DEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQESSFKADDCVHQAQEAGAALAEIT 422

Query: 375 GAFLKIKES---VETTSEKINSIKVNAERAVNNV----ETALKDSQDIASISEEFAATAE 427
           GA  +++ES   +   +E+ + +     RAV ++    E  ++ + D A+ S + A  A 
Sbjct: 423 GAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTVDSATTSNQLATLAG 482

Query: 428 ELT 430
           EL+
Sbjct: 483 ELS 485