Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 4e-28
 Identities = 69/256 (26%), Positives = 128/256 (50%), Gaps = 14/256 (5%)

Query: 197 QVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIE 256
           Q ATA A  +A +Q V+  +++T+   S     A          ++ SE+ +K +++   
Sbjct: 280 QSATAIAQMAATIQQVTHNVQSTAHAASDADQLA----------QQGSELALKSLKD--- 326

Query: 257 TMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKG 316
            M S+++ + ++G+A+  L  +++ I  V  +I  +AEQT LLALNA+IEAARAG+ G+G
Sbjct: 327 -MGSMSDAVNDIGQAVNALAEQTQSIGSVVDVITSIAEQTNLLALNAAIEAARAGEQGRG 385

Query: 317 FAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGA 376
           FAVVA E++SLA+  + S E+I+  I  +    E  +     G+      V +++ V  A
Sbjct: 386 FAVVADEVRSLAQRTRASTEEIHHIIASLRAGAERAVSTASRGEQISRDSVHSVEAVQAA 445

Query: 377 FLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAEELTASAEEQ 436
              I  +V   +     +   +E+  +  E   +    IA + ++ A  A +    +++ 
Sbjct: 446 LSGIAVAVSRITGMSQQMATASEQQSHVAEDINQQIVRIAQLCDQSAGQARQGAEISQDL 505

Query: 437 SRIMNEIDDAIEEITK 452
            R+   +    E   +
Sbjct: 506 ERMAEYLHSLAERFNR 521



 Score = 24.6 bits (52), Expect = 0.008
 Identities = 15/109 (13%), Positives = 43/109 (39%)

Query: 353 IDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDS 412
           +D G+  K    +     D       + +   + ++  I  +    ++  +NV++    +
Sbjct: 247 VDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHNVQSTAHAA 306

Query: 413 QDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDV 461
            D   ++++ +  A +        S  +N+I  A+  + + ++ I   V
Sbjct: 307 SDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVV 355