Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 493 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  112 bits (281), Expect = 2e-29
 Identities = 80/303 (26%), Positives = 154/303 (50%), Gaps = 35/303 (11%)

Query: 142 YNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATA 201
           +NA+Q      +  V+     L +    L + + + +  ++  +  ++Q A A +++ T 
Sbjct: 204 FNAMQAGYQRVVNTVARTARQLDEGAARLASSMNEVQHGMLGQQSETDQAATAINEMTTT 263

Query: 202 AADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSI 261
                  +  ++    AT +++ A      DT+  +       ++ V +V+++I  + S 
Sbjct: 264 -------VHHIAQHAGATRDLSQAA-----DTLAGS------GQVVVTRVQHSIAGLSS- 304

Query: 262 TNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVA 321
              ++   + IQ+L  +S+KIN V  +I  +AEQT LLALNA+IEAARAG+ G+GFAVVA
Sbjct: 305 --GVQQTAEMIQKLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVA 362

Query: 322 SEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGV-------IAIDEVN 374
            E+++LA+ ++ S ++I R ++ +       +D       + D  V        A+ E+ 
Sbjct: 363 DEVRNLAKRVQSSTDEITRMVSALQAGTRDAVDFMQESSFKADDCVQQAQEAGAALAEIT 422

Query: 375 GAFLKIKES---VETTSEKINSIKVNAERAVNNV----ETALKDSQDIASISEEFAATAE 427
           GA  +++ES   +   +E+ + +     RAV ++    E  ++ + D A+ S+E A  A 
Sbjct: 423 GAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVQQTMDSATTSKELATLAG 482

Query: 428 ELT 430
           EL+
Sbjct: 483 ELS 485