Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

 Score =  402 bits (1033), Expect = e-116
 Identities = 217/398 (54%), Positives = 295/398 (74%), Gaps = 4/398 (1%)

Query: 68  NFLHSSSKITGKEYEHCDEEMFKTVISDFEKLKKDENSLKTYKKDVSNTFSELHTIFKSL 127
           N+ + ++  TG E +   +   K      E +K    ++   K +++N  + +  +   +
Sbjct: 338 NYDYKTTVKTGDELQELSDSFNKMA----ENVKNLMKTMDMDKLELANLLNNVSDVMNRV 393

Query: 128 EQGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNAELLKAKEDLVRAEET 187
            +GDFT RA+  R+ N L+   N A+ NV+ ++ +L+++++ LN ++ K +++L  AEET
Sbjct: 394 AKGDFTARADESRENNKLEKAINTAVSNVADLIKELREELDLLNIQIQKVEDELKGAEET 453

Query: 188 SEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMG 247
           + QVA+AA+QVA AA+DQSAKLQ+ S++LE+T E    V  AA++TV ++ EI+ENSE+G
Sbjct: 454 ATQVAEAATQVAEAASDQSAKLQESSEELESTYENAKEVYSAAEETVKSSEEIKENSEIG 513

Query: 248 VKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEA 307
           V+KVENAI  MQSITNVI+ LGK+I+ LG + KKINEVT LIKD+AEQTGLLALNASIEA
Sbjct: 514 VEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEA 573

Query: 308 ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATIDLGISGKDEVDKGV 367
           ARAGDAGKGFAVVASEIK+LAEEIKKSVEDIN TI+GVN ++E T+DLG+ GKDEVDKGV
Sbjct: 574 ARAGDAGKGFAVVASEIKALAEEIKKSVEDINHTIDGVNSRIEDTVDLGLKGKDEVDKGV 633

Query: 368 IAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAATAE 427
           IAIDEVN A LKIKESV  ++ KIN IK  A+ A  N E ALK++QDIA++SEEF ATAE
Sbjct: 634 IAIDEVNDALLKIKESVNESAIKINGIKHGAQNASENTEGALKNAQDIAALSEEFTATAE 693

Query: 428 ELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVSKFK 465
           E+TAS EE + I+ EI    EE+T  SE++S+  ++F+
Sbjct: 694 EVTASTEELNSIIEEIRVIAEELTHVSERVSEKSNQFE 731