Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 562 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  109 bits (273), Expect = 2e-28
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 35/262 (13%)

Query: 188 SEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMG 247
           SEQVA  A +VA A+   +A ++ V+    AT E+ ++V            EI       
Sbjct: 321 SEQVAVRAEEVAGASEHAAANVETVA---AATEELAASVA-----------EIGRQVSES 366

Query: 248 VKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEA 307
            +   +A++       ++  L +A       +K+I EV  +I D+A QT LLALNA+IEA
Sbjct: 367 ARVARDAVDEAAQANTIVHGLSEA-------TKRIGEVVTMITDIAAQTNLLALNATIEA 419

Query: 308 ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGV----NRKVEATIDLG--ISGKD 361
           ARAG+AGKGFAVVA E+K+LA +  ++ ++I++ I  V     R V+A   +G  I   D
Sbjct: 420 ARAGEAGKGFAVVAGEVKNLANQTARATDEISQQIASVQAETGRAVDAIRGVGTTIGRID 479

Query: 362 EVDKGVI-AIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISE 420
           E+   +  A++E   A  +I  +VE  ++   S+         N+      ++D    S 
Sbjct: 480 EISAAIASAVEEQGAATREIARNVEEAAQGTQSVS-------GNIAGVTSAARDTGQASA 532

Query: 421 EFAATAEELTASAEEQSRIMNE 442
              A+A EL A A    RI+ +
Sbjct: 533 TVLASATELAAEAHTLRRIVQD 554



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 41/246 (16%), Positives = 94/246 (38%), Gaps = 21/246 (8%)

Query: 229 AADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVL 288
           AA+DT       +   E+G  ++  A++  +   N +E     ++    E+K++ E    
Sbjct: 229 AANDTQVEVTGQDRGDEVG--EIARAVQVFK--LNALEK--GRLEAEAQENKRLAES--- 279

Query: 289 IKDVAEQTGLLA---LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGV 345
            +   E   L A      S+   +   A       A  + +L+E++    E++     G 
Sbjct: 280 -RHHQEMKSLAADFESGVSVVVDKVAGASAEMEHTAQALSTLSEQVAVRAEEVA----GA 334

Query: 346 NRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNV 405
           +    A ++   +  +E+   V  I        ++       + + N+I      A   +
Sbjct: 335 SEHAAANVETVAAATEELAASVAEIGRQVSESARVARDAVDEAAQANTIVHGLSEATKRI 394

Query: 406 ETALKDSQDIASISEEFAATAEELTASAEEQSR----IMNEIDDAIEEITKSSEQISKDV 461
              +    DIA+ +   A  A    A A E  +    +  E+ +   +  +++++IS+ +
Sbjct: 395 GEVVTMITDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLANQTARATDEISQQI 454

Query: 462 SKFKTE 467
           +  + E
Sbjct: 455 ASVQAE 460