Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 438 a.a., chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  124 bits (310), Expect = 8e-33
 Identities = 99/355 (27%), Positives = 160/355 (45%), Gaps = 32/355 (9%)

Query: 97  EKLKKDENSLKTYKKDVSNTFSELHTIFKSLEQGDFTIRANTDRKYNALQVTTNNAIVNV 156
           E   K+ N+   Y    +N      TI     +GDF   A T  +  A+  T   A V  
Sbjct: 113 EAFAKEANTAMQY----ANQRKYFRTILTKGLRGDFVTFATTINRSLAMMETNEKAFVAF 168

Query: 157 STMVNDLKKQIEYLNAELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQL 216
           +                  K +         S  +AD AS ++  A+D S +   V+   
Sbjct: 169 AEE----------------KVRPVARAVGGASSALADNASNLSAQASDTSQQAMTVAAAA 212

Query: 217 EATSEITSAVTDAADDTVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELG 276
           E  S    AV  A ++   +  EI +       +V  A  T Q  +  +E     +Q LG
Sbjct: 213 EQASVNVQAVASAVEEFSASIREITQ-------QVNRAASTAQEASGKVEQTNSVVQTLG 265

Query: 277 NESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVE 336
           N +++I +V  LI+D+A QT LLALNA+IEAARAG+AGKGFAVVA+E+K+LA +  ++ E
Sbjct: 266 NAAQRIGDVVSLIQDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTARATE 325

Query: 337 DINRTINGVNRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKV 396
           DI + ++ +    +AT +  +    E+   V  I+E + A     E     +++I     
Sbjct: 326 DITQQVSQIQ---DATKE-AVQAMSEIGVTVAQIEETSAAVAGAVEEQNAVTQEIARNVA 381

Query: 397 NAERAVNNVETALKDSQDIASISEEFAATAEELTAS-AEEQSRIMNEIDDAIEEI 450
            A     +V  A+   Q  A  + + AA     + S + + S ++  ID  ++ +
Sbjct: 382 EAATGTQSVSEAISLVQAAAKNALDGAAEVSHSSQSMSRDSSNLIENIDSFLDRL 436



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 62/304 (20%), Positives = 129/304 (42%), Gaps = 49/304 (16%)

Query: 182 VRAEETSEQVADAASQVATAAA--DQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIE 239
           VR  +T+E V D A++V  AAA  D +A++ ++ D+    + + S +    D  ++ A  
Sbjct: 61  VRVGKTAEFV-DRATRVVAAAAQGDLNARITNI-DRRHPIASLLSGINRVLD--LSEAFA 116

Query: 240 IEENSEMGVKKVENAIETMQS------ITNVIENLGKAIQELGNESKKI-----NEVTVL 288
            E N+ M          T+ +             + +++  +    K        +V  +
Sbjct: 117 KEANTAMQYANQRKYFRTILTKGLRGDFVTFATTINRSLAMMETNEKAFVAFAEEKVRPV 176

Query: 289 IKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLA---EEIKKSVEDINRTINGV 345
            + V   +  LA NAS  +A+A D  +    VA+  +  +   + +  +VE+ + +I  +
Sbjct: 177 ARAVGGASSALADNASNLSAQASDTSQQAMTVAAAAEQASVNVQAVASAVEEFSASIREI 236

Query: 346 NRKVEATIDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNV 405
            +              +V++      E +G        VE T+  + ++  NA + + +V
Sbjct: 237 TQ--------------QVNRAASTAQEASG-------KVEQTNSVVQTLG-NAAQRIGDV 274

Query: 406 ETALKDSQDIASISEEFAATAEELTASAEEQSR----IMNEIDDAIEEITKSSEQISKDV 461
            + +   QDIAS +   A  A    A A E  +    + NE+ +   +  +++E I++ V
Sbjct: 275 VSLI---QDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTARATEDITQQV 331

Query: 462 SKFK 465
           S+ +
Sbjct: 332 SQIQ 335