Pairwise Alignments

Query, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 563 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  116 bits (290), Expect = 2e-30
 Identities = 86/279 (30%), Positives = 138/279 (49%), Gaps = 46/279 (16%)

Query: 188 SEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADDTVTAAIEIEENSEMG 247
           ++Q +  A+ VA+AA   SA +Q V+    AT E+ S++ +          +I  ++++ 
Sbjct: 322 AQQTSTQATVVASAAEQTSANVQTVAT---ATEEMASSIREIGT-------QIARSADIA 371

Query: 248 VKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDVAEQTGLLALNASIEA 307
            K V  A +T             A++ L   ++KI EV  LI D+A QT LLALNA+IEA
Sbjct: 372 GKAVSEASQT-----------SNAVRSLAEAAQKIGEVVGLITDIASQTNLLALNATIEA 420

Query: 308 ARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEATID--LGISGKDEVDK 365
           ARAG+AGKGFAVVASE+KSLA +  K+ E+I   I  + +  +  +    GI G      
Sbjct: 421 ARAGEAGKGFAVVASEVKSLAGQTAKATEEIASQIGAIQQTTQGVVTAITGIGG------ 474

Query: 366 GVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDSQDIASISEEFAAT 425
               I  +N     I  ++E  S   N I  N ++A              A+ ++E   +
Sbjct: 475 ---TIGSINDITTAIAAAIEEQSAATNEISRNVQQA--------------AAGTQEVTGS 517

Query: 426 AEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVSKF 464
             ++T +A E      ++  A  E+++ +E + +DV  F
Sbjct: 518 IVQVTQAAGEAGNAAGQVLTAAGELSRQAELMRRDVETF 556