Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

 Score =  323 bits (827), Expect = 3e-92
 Identities = 160/383 (41%), Positives = 257/383 (67%), Gaps = 1/383 (0%)

Query: 536 ENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDLKELHNAVGRLNMLATE 595
           ++++S+   TVRV+  +LD++MN+VGE+V+ R    ++      + +  AV  L+++  +
Sbjct: 353 KHAASEAETTVRVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTAD 412

Query: 596 LQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRTVLDELAEPLTH 655
           LQ  VM  RM P+  VF RFPR VRD A+ L KEI+ E+ G + +LD+ +++ LA+PL H
Sbjct: 413 LQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVH 472

Query: 656 LIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGIDPEAMRKKAFE 715
           L+RN++DHGIE  DER   GK   G + L A ++ D + + I DDGKG+DP  +R KA E
Sbjct: 473 LVRNAVDHGIEMPDEREASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVE 532

Query: 716 KGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKIESLGGSVTVNS 775
           KGL  K+ AE+L++++  N+IF PGFST   +SDVSGRGVGMDVV++KI  L GS+ + S
Sbjct: 533 KGLMDKDAAERLSESDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFS 592

Query: 776 EVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQIKNLEGQEAIIY 835
             G+G++I + +PLT+AI+ TL++ L    +A PL +V ++  ++  +   ++GQE +I 
Sbjct: 593 AKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIV 652

Query: 836 RNHILPVIWLKDAL-NTSGFSDSDDLYVVVVEKNKGKVGMILDEVIGRDEIVVKPLTGIL 894
           R+  LP+ +LK  L       +  + +VV++     ++G ++D+++G++E+V+KPL  +L
Sbjct: 653 RDKALPLFYLKRWLVQGQVHEEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKML 712

Query: 895 KNINGLAGATILGDGRVALILDL 917
           +   G++GATI GDGR+ALILD+
Sbjct: 713 QGTPGMSGATITGDGRIALILDV 735



 Score = 74.3 bits (181), Expect = 3e-17
 Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 1/108 (0%)

Query: 5   EQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISS 64
           E+  + F+ EA E L+ L++ +VELE+ P+D++ ++N IFR  HT+KG A  L    +  
Sbjct: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDAD-LLNAIFRGFHTVKGGAGFLQLNELVE 65

Query: 65  LTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTT 112
             H  E++ D +R G+ +V+ E++D++ + LD + +M  +V +  + T
Sbjct: 66  CCHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVT 113