Pairwise Alignments

Query, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

Subject, 730 a.a., Chemotaxis protein CheA from Methylophilus sp. DMC18

 Score =  287 bits (734), Expect = 2e-81
 Identities = 148/388 (38%), Positives = 246/388 (63%), Gaps = 5/388 (1%)

Query: 532 KKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDLKELHNAVGRLNM 591
           ++Q + + + +S  +R++  KLD+L+NLVGE++I  A  T I+ K     ++ A   ++ 
Sbjct: 326 QRQVKETKNAESNYIRIDANKLDELINLVGELIIAGAGATLISNKIGDSAMNEATSNIST 385

Query: 592 LATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGSDIELDRTVLDELAE 651
           L  ++++  + +RM+ +   F+RF R VRD +K L K+I  EI G + ELD+TV++++++
Sbjct: 386 LVEQVRDSALALRMVQIGATFSRFNRVVRDVSKELGKDIRLEISGEETELDKTVVEKISD 445

Query: 652 PLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIIIRDDGKGIDPEAMRK 711
           PLTHL+RNS+DHGIE A+ R+  GKP  G LKL A      + I + DDG G++ + +  
Sbjct: 446 PLTHLVRNSMDHGIESAEVRVAKGKPAYGTLKLNAFHDSGSIVIEVSDDGAGLNRDKILA 505

Query: 712 KAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVGMDVVRSKIESLGGSV 771
           KA +KGL S E++  L+D +  N+IF  GFSTA+ VS++SGRGVGMDVV+  I++L G++
Sbjct: 506 KAIDKGLVSPEQS--LSDKDIYNLIFEAGFSTADAVSNLSGRGVGMDVVKRNIQALRGTI 563

Query: 772 TVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVISVEKEQIKNL--EG 829
            + S  G G  +++ LPLT+AII   L+ + +  Y +PL  V++ I +     ++   + 
Sbjct: 564 DIQSRPGLGCTMSIRLPLTLAIIDGFLVGVADSSYVVPLDMVVECIELSAADYESSVNDQ 623

Query: 830 QEAIIYRNHILPVIWLKDALNTSGFSDSDDLYVVVVEKNKGKVGMILDEVIGRDEIVVKP 889
           +  I  R  +LP + L+D   + G   +    VV+   N+ K+G+++D++IG  + V+KP
Sbjct: 624 RNFINLRGEVLPYLKLRDEFESKGEPPARQNIVVMQYANQ-KIGLVVDKLIGEFQTVIKP 682

Query: 890 LTGILKNINGLAGATILGDGRVALILDL 917
           L  + +N+ G+ G TILG G VAL+LD+
Sbjct: 683 LGKVFENVKGIGGFTILGSGSVALVLDV 710



 Score = 84.0 bits (206), Expect = 3e-20
 Identities = 44/117 (37%), Positives = 74/117 (63%), Gaps = 4/117 (3%)

Query: 4   MEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHIS 63
           +++  ++++ E+ + LQ + + ++ LE  P D E+I N IFR+AHT+KGSA   G + I 
Sbjct: 3   LDESLQIYIIESRDLLQQMEEALLTLEQNPGDEEKI-NAIFRAAHTIKGSAGLFGLDFII 61

Query: 64  SLTHHMEDILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLV 120
           S TH  E +LD +R+G+I+V  EIV L  +  D +  ++  V++G   T+ D D+LV
Sbjct: 62  SFTHVAESVLDKVRNGEIEVTEEIVALFLEVGDFISKLIDHVAEG---TTPDADTLV 115