Pairwise Alignments

Query, 365 a.a., chemotaxis response regulator protein-glutamate methylesterase from Methanococcus maripaludis S2

Subject, 1423 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score = 79.7 bits (195), Expect = 5e-19
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 9/186 (4%)

Query: 181 SSTGGPPVVSS---IISNIPKNTPPIFI-VQHMPKGFTRVFAERMNNNSAITVKEAEHGE 236
           S++G  PV S+   ++S +P      FI V H+      + A+ +  ++++ V++A  G 
Sbjct: 3   SASGLRPVGSACKRLLSTLPGGHRMAFILVLHLDPTHESLMADLLAPHTSMVVQQAADGM 62

Query: 237 IVKPDHAYVAPGDSQMVLQKRGGNVYIIIDENMPKIHGTKPTVDVTAEYVTKYYGKNTIG 296
           +V+ DH YV P      L    G++ +   E     HG +   D   + +   YG   +G
Sbjct: 63  LVEADHLYVIP--PAFYLSVEAGHLRLSTPEAP---HGARLPFDFLLKSLAGEYGAAAMG 117

Query: 297 VLLTGIGRDGANGLKMVKNKGGYTIAQNQDTCVIYGMPKTAIEMNVVDKVMDPIDIPLEI 356
           V+L+G G DG  GL+ V+ KGG+T+AQ+       GMP++AI    VD V    +IP  +
Sbjct: 118 VVLSGTGTDGTIGLEAVRVKGGFTVAQDPKEADYDGMPRSAIGAGAVDLVAPVTEIPEAL 177

Query: 357 IKFAKK 362
           +  A++
Sbjct: 178 LARARQ 183



 Score = 40.4 bits (93), Expect = 3e-07
 Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 18/188 (9%)

Query: 6    VLIVDDSAFMRKVLEDILKSDDEIEVVATAKDGKEAF-ELVKKLEPNVITMDVEMPIMNG 64
            V IVDD   +R+ +  +L+ D          D  EAF E      P  + +D  +P M G
Sbjct: 1221 VFIVDDDDLVRQGMRSVLEEDGR---TVEDYDSCEAFIEAFGTGRPGCLLVDAYLPGMKG 1277

Query: 65   IDATKQIMAYKPTPILMLSAVTKQGSE---ATLKALDNGAVDFIEKPSGSVSLDIRKIGE 121
            ++  K + A        ++A+   G+      ++A+  GA DFIEKP G    D+     
Sbjct: 1278 LELLKHLQASSHG----MAAIMITGNSDVRMAVEAMKAGAFDFIEKPVG--RRDLLACVT 1331

Query: 122  KIIKQVKDASKSKVRIKSSRILENIKKEKQD-----ESSTPKPQVEKTSGLSPEKLNDTA 176
            + + Q ++A +      ++  L ++   +++      +  P   +    G+S   + +  
Sbjct: 1332 QALDQAQNAQRPVWHAAAAEQLSSLTHRQREILDLVLAGHPSKNIAADLGISQRTVENHR 1391

Query: 177  ILIGSSTG 184
              I   TG
Sbjct: 1392 AAIMKKTG 1399



 Score = 32.7 bits (73), Expect = 6e-05
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 5/71 (7%)

Query: 6    VLIVDDSAFMRKVLEDILKSDDEIEVVATAKDGKEAFELVKK--LEPNVITMDVEMPI-M 62
            VL+++D   +R +LE +L +  E   V  A DG  A  LV++  + P +I  D  +P  M
Sbjct: 1079 VLVIEDDPDVRSLLELLLTT--EGHAVTVAPDGDTAVALVERNAIRPELILADYNLPNGM 1136

Query: 63   NGIDATKQIMA 73
             G++   ++ A
Sbjct: 1137 TGLETASRLRA 1147