Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 171 a.a., Positive regulator of CheA protein activity (CheW) from Variovorax sp. SCN45

 Score =  101 bits (251), Expect = 6e-27
 Identities = 56/142 (39%), Positives = 88/142 (61%), Gaps = 5/142 (3%)

Query: 6   KVVVFKLASNEYCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRRKLNL 65
           +VV FKL   EY + +  V+E+     +T I N P+YI GV N+RG I+PIID+R K   
Sbjct: 25  EVVTFKLGEEEYGIDIQKVQELRGYDAVTRIANAPEYIKGVVNLRGIIVPIIDMRIKFK- 83

Query: 66  FEDLGDESIDE-KLVMVVEIDGVPIGILVDSVSDVMQISAEQIEDIEGIKKNASGEYIEG 124
              LGD + D+  +V+V+ I G  +G++VDSVSDV+ +SAEQI+    +      +Y+ G
Sbjct: 84  ---LGDPTYDQFTVVIVLNIGGRVVGMVVDSVSDVITLSAEQIKPAPEMGSVLDADYLIG 140

Query: 125 IAKIGNRLIIILDIKNLIDPQE 146
           +  + +R++I++DI  L+   E
Sbjct: 141 LGTLDDRMLILVDIDRLMSSDE 162