Pairwise Alignments

Query, 147 a.a., chemotaxis protein CheW from Methanococcus maripaludis S2

Subject, 175 a.a., Positive regulator of CheA protein activity (CheW) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 92.8 bits (229), Expect = 2e-24
 Identities = 48/138 (34%), Positives = 85/138 (61%), Gaps = 9/138 (6%)

Query: 8   VVFKLASNEYCLRVTGVREVLKLQDITSIPNTPDYIVGVTNIRGEIMPIIDLRRKLNLFE 67
           + F+L   EY + +  V+E+   ++ T I N P +I GV N+RG I+P++DLR KL    
Sbjct: 29  LTFRLGGEEYGIDILRVQEIRSYEEPTRIANAPAFIKGVVNLRGVIVPVVDLRIKL---- 84

Query: 68  DLGDESIDEK---LVMVVEIDGVPIGILVDSVSDVMQISAEQIEDIEGIKKNASGEYIEG 124
             G E ++     +V+V+ + G  +G +VDSVSDV++++ + I+    +  N +  +I G
Sbjct: 85  --GCEKVEYNGFTVVIVLNVHGRVVGAVVDSVSDVLELAGDLIKPAPEMNTNVNTSFITG 142

Query: 125 IAKIGNRLIIILDIKNLI 142
           IA +G R++I++DI+ L+
Sbjct: 143 IASVGERMLILMDIEALM 160